Fastq Files for D. yakuba and D. simulans population genomics datsets

Due to IT issues with the UCI public data servers, fastq files have been moved. Files may be accessed here:

D. yakuba and D. simulans

We were recently notified that the NCBI data processing pipeline for the SRA has modified the .bam files for our D. yakuba and D. simulans genomic sequencing project. The modifications have removed all paired end information, renamed reads, and possibly altered samtools flags. NCBI claims to have fixed the issue but if users encounter errors, we strongly suggest that those working with the data download and realign the fastq files above rather than using the files deposited in the SRA.

© 2012 Rebekah Rogers




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